fmridenoise.workflows package¶
Submodules¶
fmridenoise.workflows.base module¶
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class
fmridenoise.workflows.base.WorkflowBuilder(bids_dir: str, subjects: List[str], tasks: List[str], conf_raw: List[str], conf_json: List[str], tr_dic: dict, pipelines_paths: List[str], high_pass: float, low_pass: float)¶ Bases:
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build(name: str, base_dir: str) → nipype.pipeline.engine.workflows.Workflow¶
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use_fmri_prep(fmri_prep_files: List[str])¶
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use_fmri_prep_aroma(fmri_aroma_files: List[str])¶
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with_runs(runs: List[str])¶
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with_sessions(sessions: List[str])¶
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fmridenoise.workflows.base.init_fmridenoise_wf(bids_dir, derivatives: List[str], task: List[str], session: List[str], subject: List[str], runs: List[int], pipelines_paths: Set[str], high_pass=0.008, low_pass=0.08, base_dir='/tmp/fmridenoise', name='fmridenoise_wf')¶